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CellType
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Multiscale Models
Example
Let’s go through an example. We’ll construct a model in which an intracellular cell cycle network (ODE) regulates the division of motile cells which (CPM) release a diffusive cytokine (PDE) which, in turn, controls the cell cycle (ODE).
Models
Built-in Examples
Cellular Potts Models
Differential Adhesion: Cell Sorting in Two Dimensions
Morpheus Model ID:
M0021
Introduction This model shows the original cellular Potts model (a.k.a. Glazier-Graner model) of cell sorting based on the Steinberg’s differential adhesion hypothesis. Yellow cells engulf the red cells as a result of differential adhesion.
F. Graner
,
J. A. Glazier
(Authors)
Models
Published Models
Human
Spatial Effects on Killing Kinetics of Cytotoxic T Lymphocytes
Morpheus Model ID:
M9495
This model also requires the separate file boundary.tiff. Introduction The immune system plays an important role in controlling infections and tumors. Knowledge about the mechanisms through which the immune system accomplishes this can be exploited to develop immunotherapies.
R. J. Beck
,
D. I. Bijker
,
J. B. Beltman
(Authors)
J. B. Beltman
,
D. Jahn
(Contributors)
DOI:10.1371/journal.pcbi.1007972
Models
Published Models
Cell Culture
MDCK EMT C
Morpheus Model ID:
M7123
Multiple models in epithelial-mesenchymal transitions (EMT) Introduction We model epithelial-mesenchymal transition (EMT) by first assembling an ODE model for intracellular Yes-associated protein (YAP) signalling and then embedding this single cell model within individual cells in a multiscale simulation.
N. Mukhtar
,
E. N. Cytrynbaum
,
L. Edelstein-Keshet
(Authors)
E. N. Cytrynbaum
,
Y. Xiao
(Contributors)
DOI:10.1016/j.bpj.2022.04.010
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